Table 1 Summary statistics of A. arguta genome assemblies

Total size of assembled unitigs (Mb)

2,919.0

Number of unitigs

1,104,265

N50 value of unitig length (Mb)

0.94

Total size of assembled genomes (Mb)

615.2

595.0

570.2

552.7

Number of base chromosomes

29

29

29

29

Number of telomeres (pairs)

38 (12)

38 (13)

33 (11)

33 (9)

Number of definite centromeres

29

29

29

29

Genome BUSCOs (%)

99.2

TE size (%)

41.02

39.51

38.85

38.89

GC content (%)

35.45

35.43

35.41

35.49

LTR assembly index score

16.86

17.62

16.93

17.15

Gene BUSCOs (%)

97.0

Number of genes/transcripts

42,263/52,105

41,377/51,041

39,833/49,271

39,222/48,363

Number of shared genes

40,859

40,063

38,638

38,098

Number of specific genes

1,404

1,314

1,195

1,124